| Protein: | CSCL4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 756 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSCL4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
612.0 | [0..1] | [756..1] |
|
|
605.0 | [0..1] | [753..1] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MATLTDIGVA ATINILTAFA FFIAFAILRL QPVNDRVYFP KWYLKGLRSS PIKTGGFASK 60
61 FVNLDFRSYI RFLNWMPQAL RMPEPELIDH AGLDSVVYLR IYLLGLKIFF PIACIAFTVM 120
121 VPVNWTNSTL DQLKNLTFSD IDKLSISNIP TGSSRFWVHL CMAYVITFWT CFVLQREYKH 180
181 IASMRLQFLA SEH
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [194-363] |
1 11 21 31 41 51
| | | | | |
1 RRPDQFTVLV RNIPPDPDES VSELVEHFFK VNHPDYYLTY QAVYNANKLS ELVQKRMKLQ 60
61 NWLDYYQNKH SRNPSKRPLI KIGFLGCWGE EVDAIDHYIE KIEGLTRKIS EEKETVMSST 120
121 KSLVPAAFVS FKKRWGAVVC SQTQQSRNPT EWLTEWAPEP RDIYWDNLAL
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1zh5A |
| Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-546] |
1 11 21 31 41 51
| | | | | |
1 PYVQLTIRRL VIAVAFFFLT FFFMIPIAFV QTLANIEGIE KAVPFLKPLI EVKTVKSFIQ 60
61 GFLPGIALKI FLIVLPSILM LMSKFEGFIS KSSLERRCAS RYYMFQFINV FLCSIIAGTA 120
121 LQQLDSFLNQ SATEIPKTIG VSIPMKATFF ITYIMVDGWA GVAGEILRLK PLIIYHLKNF 180
181 FLV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [547-645] |
1 11 21 31 41 51
| | | | | |
1 KTEKDREEAM DPGTIGFNTG EPQIQLYFIL GLVYAAVSPI LLPFILVFFA LAYVVYRHQI 60
61 INVYNQEYES AAAFWPDVHR RVVIALIVSQ LLLMGLLST
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [646-756] |
1 11 21 31 41 51
| | | | | |
1 KKAARSTPLL FILPVLTIGF HKFCQGRYQP IFVTYPLQDA MVKDTLERMR EPNLNLKTFL 60
61 QNAYAHPVFK AADNLANEMV VEEPAPDKTP DLVATKRGSR RFNSGSAETF T
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.581 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.529 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.466 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.466 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.429 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.426 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.369 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.365 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.365 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.304 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
