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View Structure Prediction Details

Protein: gi|110742199, gi...
Organism: Arabidopsis thaliana
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110742199, gi....

Description E-value Query
Range
Subject
Range
gi|21592797 - gi|21592797|gb|AAM64746.1| unknown [Arabidopsis thaliana]
222.0 [0..1] [190..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMMLLQIPP SSSLLNTRNL QIRFFHSSVS ASSKKFRCRA VREKAEDIDK NISPPSSSPP  60
   61 PPSAEEVTKK YGLEVGLWKI LSSKDDEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDGDNKKKKS KTDEAKELLA KYGGAYLATS ITLSLISFSL CYVLVTSGVD VQALLLKVGI  60
   61 STNETGEKVG AFALAYAAHK AASPIRFPPT VALTPIVANW IGKKVDKEKD DDK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.408935
Match: PF06916.4
Description: No description for PF06916.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle