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View Structure Prediction Details

Protein: gi|6899885, gi|1...
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6899885, gi|1....

Description E-value Query
Range
Subject
Range
gi|42572761 - gi|42572761|ref|NP_974476.1| unknown protein [Arabidopsis thaliana]
361.0 [0..1] [221..1]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLHCLST LHLLPRTHHP KTLNSLKPIT TKSQPCKTPE IPSTPNALQL LKSSSLPLAV  60
   61 IALPFFLDPQ DAAAAGGEFG ILEGRSFALI HPIVMGGLFA YTLWTGYLGW QWRRVRTIQS 120
  121 EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKHFDAGSVL LGFGVLEAVF GGVNTYLRTG KLFPGPHLYA GAGITVLWAA AAALVPAMQK  60
   61 GNDTARSLHI ALNAVNVLLF IWQIPTGLDI VLKVFEFTKW P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle