| Protein: | PP145_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP145_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
648.0 | [0..3] | [603..379] |
|
|
621.0 | [0..5] | [603..99] |
|
|
615.0 | [0..4] | [603..137] |
|
|
611.0 | [0..5] | [603..87] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MAISSASLIS SFSHAETFTK HSKIDTVNTQ NPILLISKCN SLRELMQIQA YAIKSHIEDV 60
61 SFVAKLINFC TESPTESSMS YARHLFEAMS EPDIVIFNSM ARGYSRFTNP LEVFSLFVEI 120
121 LEDGILPDNY
|
| Detection Method: |  |
| Confidence: | 8.0 |
| Match: | 2j9qA |
| Description: | No description for 2j9qA was found. |
|
Region A: Residues: [131-500] |
1 11 21 31 41 51
| | | | | |
1 TFPSLLKACA VAKALEEGRQ LHCLSMKLGL DDNVYVCPTL INMYTECEDV DSARCVFDRI 60
61 VEPCVVCYNA MITGYARRNR PNEALSLFRE MQGKYLKPNE ITLLSVLSSC ALLGSLDLGK 120
121 WIHKYAKKHS FCKYVKVNTA LIDMFAKCGS LDDAVSIFEK MRYKDTQAWS AMIVAYANHG 180
181 KAEKSMLMFE RMRSENVQPD EITFLGLLNA CSHTGRVEEG RKYFSQMVSK FGIVPSIKHY 240
241 GSMVDLLSRA GNLEDAYEFI DKLPISPTPM LWRILLAACS SHNNLDLAEK VSERIFELDD 300
301 SHGGDYVILS NLYARNKKWE YVDSLRKVMK DRKAVKVPGC SSIEVNNVVH EFFSGDGVKS 360
361 ATTKLHRALD
|
| Detection Method: | |
| Confidence: | 36.30103 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [501-603] |
1 11 21 31 41 51
| | | | | |
1 EMVKELKLSG YVPDTSMVVH ANMNDQEKEI TLRYHSEKLA ITFGLLNTPP GTTIRVVKNL 60
61 RVCRDCHNAA KLISLIFGRK VVLRDVQRFH HFEDGKCSCG DFW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.856 | c.55.1 | Actin-like ATPase domain |
