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Protein Overview: PP145_ARATH

General Information:
Name(s) found: PP145_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: chloroplast RNA processing [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSASLIS SFSHAETFTK HSKIDTVNTQ NPILLISKCN SLRELMQIQA YAIKSHIEDV  60
   61 SFVAKLINFC TESPTESSMS YARHLFEAMS EPDIVIFNSM ARGYSRFTNP LEVFSLFVEI 120
  121 LEDGILPDNY TFPSLLKACA VAKALEEGRQ LHCLSMKLGL DDNVYVCPTL INMYTECEDV 180
  181 DSARCVFDRI VEPCVVCYNA MITGYARRNR PNEALSLFRE MQGKYLKPNE ITLLSVLSSC 240
  241 ALLGSLDLGK WIHKYAKKHS FCKYVKVNTA LIDMFAKCGS LDDAVSIFEK MRYKDTQAWS 300
  301 AMIVAYANHG KAEKSMLMFE RMRSENVQPD EITFLGLLNA CSHTGRVEEG RKYFSQMVSK 360
  361 FGIVPSIKHY GSMVDLLSRA GNLEDAYEFI DKLPISPTPM LWRILLAACS SHNNLDLAEK 420
  421 VSERIFELDD SHGGDYVILS NLYARNKKWE YVDSLRKVMK DRKAVKVPGC SSIEVNNVVH 480
  481 EFFSGDGVKS ATTKLHRALD EMVKELKLSG YVPDTSMVVH ANMNDQEKEI TLRYHSEKLA 540
  541 ITFGLLNTPP GTTIRVVKNL RVCRDCHNAA KLISLIFGRK VVLRDVQRFH HFEDGKCSCG 600
  601 DFW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 8.0 No description for 2j9qA was found.
    2 View Details [131..500] PSI-BLAST 36.30103 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    3 View Details [501..603] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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