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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP145_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISSASLIS SFSHAETFTK HSKIDTVNTQ NPILLISKCN SLRELMQIQA YAIKSHIEDV  60
   61 SFVAKLINFC TESPTESSMS YARHLFEAMS EPDIVIFNSM ARGYSRFTNP LEVFSLFVEI 120
  121 LEDGILPDNY TFPSLLKACA VAKALEEGRQ LHCLSMKLGL DDNVYVCPTL INMYTECEDV 180
  181 DSARCVFDRI VEPCVVCYNA MITGYARRNR PNEALSLFRE MQGKYLKPNE ITLLSVLSSC 240
  241 ALLGSLDLGK WIHKYAKKHS FCKYVKVNTA LIDMFAKCGS LDDAVSIFEK MRYKDTQAWS 300
  301 AMIVAYANHG KAEKSMLMFE RMRSENVQPD EITFLGLLNA CSHTGRVEEG RKYFSQMVSK 360
  361 FGIVPSIKHY GSMVDLLSRA GNLEDAYEFI DKLPISPTPM LWRILLAACS SHNNLDLAEK 420
  421 VSERIFELDD SHGGDYVILS NLYARNKKWE YVDSLRKVMK DRKAVKVPGC SSIEVNNVVH 480
  481 EFFSGDGVKS ATTKLHRALD EMVKELKLSG YVPDTSMVVH ANMNDQEKEI TLRYHSEKLA 540
  541 ITFGLLNTPP GTTIRVVKNL RVCRDCHNAA KLISLIFGRK VVLRDVQRFH HFEDGKCSCG 600
  601 DFW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle