Protein: | PP145_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 603 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP145_ARATH.
Description | E-value | Query Range |
Subject Range |
|
648.0 | [0..3] | [603..379] |
|
621.0 | [0..5] | [603..99] |
|
615.0 | [0..4] | [603..137] |
|
611.0 | [0..5] | [603..87] |
Region A: Residues: [1-130] |
1 11 21 31 41 51 | | | | | | 1 MAISSASLIS SFSHAETFTK HSKIDTVNTQ NPILLISKCN SLRELMQIQA YAIKSHIEDV 60 61 SFVAKLINFC TESPTESSMS YARHLFEAMS EPDIVIFNSM ARGYSRFTNP LEVFSLFVEI 120 121 LEDGILPDNY |
Detection Method: | |
Confidence: | 8.0 |
Match: | 2j9qA |
Description: | No description for 2j9qA was found. |
Region A: Residues: [131-500] |
1 11 21 31 41 51 | | | | | | 1 TFPSLLKACA VAKALEEGRQ LHCLSMKLGL DDNVYVCPTL INMYTECEDV DSARCVFDRI 60 61 VEPCVVCYNA MITGYARRNR PNEALSLFRE MQGKYLKPNE ITLLSVLSSC ALLGSLDLGK 120 121 WIHKYAKKHS FCKYVKVNTA LIDMFAKCGS LDDAVSIFEK MRYKDTQAWS AMIVAYANHG 180 181 KAEKSMLMFE RMRSENVQPD EITFLGLLNA CSHTGRVEEG RKYFSQMVSK FGIVPSIKHY 240 241 GSMVDLLSRA GNLEDAYEFI DKLPISPTPM LWRILLAACS SHNNLDLAEK VSERIFELDD 300 301 SHGGDYVILS NLYARNKKWE YVDSLRKVMK DRKAVKVPGC SSIEVNNVVH EFFSGDGVKS 360 361 ATTKLHRALD |
Detection Method: | |
Confidence: | 36.30103 |
Match: | 1w3bA |
Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [501-603] |
1 11 21 31 41 51 | | | | | | 1 EMVKELKLSG YVPDTSMVVH ANMNDQEKEI TLRYHSEKLA ITFGLLNTPP GTTIRVVKNL 60 61 RVCRDCHNAA KLISLIFGRK VVLRDVQRFH HFEDGKCSCG DFW |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.856 | c.55.1 | Actin-like ATPase domain |