| Protein: | NLP8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 947 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLP8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
846.0 | [0..1] | [946..1] |
|
|
828.0 | [0..1] | [935..1] |
|
|
780.0 | [0..40] | [945..1] |
|
|
768.0 | [0..22] | [933..402] |
|
|
765.0 | [0..17] | [926..166] |
|
|
754.0 | [0..1] | [946..1] |
|
|
750.0 | [0..17] | [941..2] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MENPFASREK GFGNYSDFPT EQMDGLSSNF GSGVRNLISD DMFNPSSELM NFDSLAAWCN 60
61 SPSATDILFA QYGLSNSQPM PFGAFTSFHV ADPKATSLTR SFYDLESSYY GEERSSAQEM 120
121 NSQFHRSSDS DELSGKRRKV VNQKIGFPNV LNC
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-348] |
1 11 21 31 41 51
| | | | | |
1 TIPRSLSHSL DEKMLKALSL FMESSGSGEG ILAQVWTPIK TGDQYLLSTC DQAYLLDPRF 60
61 SQYREVSRRF TFAAEANQCS FPGLPGRVFI SGVPEWTSNV MYYKTDEYLR MKHAIDNEVR 120
121 GSIAIPILEA SGTSCCAVME LVTSKEKPNF DMEMDSVCRA LQAVNLRTAA IPRPQYLSSS 180
181 QRDALAEIQD VLRTV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [349-577] |
1 11 21 31 41 51
| | | | | |
1 CHAHKLPLAL AWIPCRKDQS IRVSGQKSGE NCILCIEETA CYVNDMEMEG FVHACLEHCL 60
61 REKEGIVGKA FISNQPFFSS DVKAYDISEY PIVQHARKYG LNAAVAIKLR STYTGEDDYI 120
121 LELFLPVSMK GSLEQQLLLD SLSGTMQRIC RTLRTVSEVG STKKEGTKPG FRSSDMSNFP 180
181 QTTSSENFQT ISLDSEFNST RSMFSGMSSD KENSITVSQG TLEQDVSKA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [578-715] |
1 11 21 31 41 51
| | | | | |
1 RTPEKKKSTT EKNVSLSALQ QHFSGSLKDA AKSLGGETSA YFQAWVYFFC PTTLKRICRQ 60
61 HGIMRWPSRK INKVNRSLRK IQTVLDSVQG VEGGLKFDSA TGEFIAVRPF IQEIDTQKGL 120
121 SSLDNDAHAR RSQEDMPD
|
| Detection Method: | |
| Confidence: | 50.080922 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [716-844] |
1 11 21 31 41 51
| | | | | |
1 DTSFKLQEAK SVDNAIKLEE DTTMNQARPG SFMEVNASGQ PWAWMAKESG LNGSEGIKSV 60
61 CNLSSVEISD GMDPTIRCSG SIVEPNQSMS CSISDSSNGS GAVLRGSSST SMEDWNQMRT 120
121 HNSNSSESG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [845-947] |
1 11 21 31 41 51
| | | | | |
1 STTLIVKASY REDTVRFKFE PSVGCPQLYK EVGKRFKLQD GSFQLKYLDD EEEWVMLVTD 60
61 SDLQECLEIL HGMGKHSVKF LVRDLSAPLG SSGGSNGYLG TGL
|
| Detection Method: | |
| Confidence: | 19.09691 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
