Protein: | Y1796_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 711 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1796_ARATH.
Description | E-value | Query Range |
Subject Range |
|
441.0 | [0..49] | [708..8] |
Region A: Residues: [1-107] |
1 11 21 31 41 51 | | | | | | 1 MSLVVGQSLG LTLVGDGLSL RNSKINVGKS KFFSVNRRRL ARAALVQARP KEDGAAASPS 60 61 PSSRPASVVQ YRRADLADDL QAEARALGRA IDASIYSPEL IARKHGS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [108-552] |
1 11 21 31 41 51 | | | | | | 1 QPFKALRRSL EILGALGGFA LKLGIDQKQG NLEKNMKKRA IELRRIFTRL GPTFVKLGQG 60 61 LSTRPDLCPP DYLEELAELQ DALPTFPDAE AFACIERELD LSLETIFSSV SPEPIAAASL 120 121 GQVYKAQLRY SGQVVAVKVQ RPGIEEAIGL DFYLIRGVGK LINKYVDFIT TDVLTLIDEF 180 181 ACRVYQELNY VQEAQNARRF KKLYADKADV LVPDIFWDYT SRKVLTMEWV EGTKLNEQLA 240 241 IESQGLKVLD LVNTGIQCSL RQLLEYGFFH ADPHPGNLLA TPDGKLAFLD FGMMSETPEE 300 301 ARFAIIGHVV HLVNRDYEAM ARDYYALKFL SPDVDVTPII PALRDFFDDA LNYTVSELNF 360 361 KTLVDGLGAV FYQYPFNVPP YYALILRSLT VLEGLALYAD PNFKVLAASY PYFAKRLLTD 420 421 PNPYLRDALI ELLFKDGKFR WNRLE |
Detection Method: | |
Confidence: | 42.69897 |
Match: | 2acxA |
Description: | No description for 2acxA was found. |
Region A: Residues: [553-711] |
1 11 21 31 41 51 | | | | | | 1 NLLQQGSKDR DFSAKDALQP VLKLLLDPNG EELRLLVIKE AVRVSEAIAL GTVVDTYNSL 60 61 PEFLRSLVFN GNGNGPLTMS TAELQSTLEL RDQVSRIWGL LQSSESFDPA ILQPILQVLQ 120 121 QPEARRLGGR VAGGVGQRLA ARFLQQLLRA TTPSSAPSP |
Detection Method: | |
Confidence: | 25.30103 |
Match: | 1s6iA |
Description: | Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.482343911625985 | bayes_pls_golite062009 |