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View Structure Prediction Details

Protein: FRS6_ARATH
Organism: Arabidopsis thaliana
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRS6_ARATH.

Description E-value Query
Range
Subject
Range
FAR1_ARATH - Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1
431.0 [0..37] [703..4]
gi|115457878, gi... - gi|50923349|ref|XP_472035.1| OSJNBb0002N06.8 [Oryza sativa (japonica cultivar-group)], gi|38346868|e...
425.0 [0..5] [703..23]
gi|116309530 - gi|116309530|emb|CAH66594.1| OSIGBa0092G14.5 [Oryza sativa (indica cultivar-group)]
421.0 [0..5] [703..23]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSESVDED VQASAYLEND EVRERDDPMS DTLRIGEEAL VCSSEHEIDV GFCQNEERKS  60
   61 EEETMGGFDE QSGLLV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.312 N/A N/A b.1.18 E set domains
View Download 0.300 N/A N/A d.223.1 Polo domain
View Download 0.271 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.250 N/A N/A b.1.18 E set domains
View Download 0.245 N/A N/A d.58.7 RNA-binding domain, RBD
View Download 0.227 N/A N/A b.43.4 Riboflavin synthase domain-like
View Download 0.219 N/A N/A a.65.1 Annexin

Predicted Domain #2
Region A:
Residues: [77-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DERKEFDAPA VGMEFESYDD AYNYYNCYAS EVGFRVRVKN SWFKRRSKEK YGAVLCCSSQ  60
   61 GFKRINDVNR VRKETRTGCP AMIRMRQVDS KRWRVVEVTL DHNHLLGC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.408935
Match: PF03101.6
Description: No description for PF03101.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [185-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLYKSVKRKR KCVSSPVSDA KTIKLYRACV VDNGSNVNPN STLNKKFQNS TGSPDLLNLK  60
   61 RGDSAAIYNY FCRMQLTNPN FFYLMDVNDE GQLRNVFWAD AFSKVSCSYF GDVIFIDSSY 120
  121 ISGKFEIPLV TFTGVNHHGK TTLLSCGFLA GETMESYHWL LKVWLSVMKR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [355-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPQTIVTDRC KPLEAAISQV FPRSHQRFSL THIMRKIPEK LGGLHNYDAV RKAFTKAVYE  60
   61 TLKVVEFEAA WGFMVHNFGV IENEWLRSLY EERAKWAPVY LKDTFFAGIA AAHPGETLKP 120
  121 FFERYVHKQT PLKEFLDKYE LALQKKHREE TLSDIESQTL NT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [517-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AELKTKCSFE TQLSRIYTRD MFKKFQIEVE EMYSCFSTTQ VHVDGPFVIF LVKERVRGES  60
   61 SRREIRDFEV LYNRSVGEVR CICSCFNFYG YLCRHALCVL NFNGVEEIPL RYILPRWRKD 120
  121 YKRLHFADNG LTGFVDGTDR VQWFDQLYKN SLQVVEEGAV SLDHYKVAMQ VLQESLDKVH 180
  181 SVEEKQD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle