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View Structure Prediction Details

Protein: gi|18398129, gi|...
Organism: Arabidopsis thaliana
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18398129, gi|....

Description E-value Query
Range
Subject
Range
gi|159466814, gi... - gi|33235189|emb|CAE17329.1| Tab2 protein [Chlamydomonas reinhardtii], gi|33235187|emb|CAE17328.1| Ta...
442.0 [0..40] [374..24]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLGFNTRR IQTPSLPRIP KPSSFTKPIK THHLFSSETL LKRCRFVSRS LPESSLSITK  60
   61 EQEVANEVEE DDPTSELSYL DPESDADSIK EWELDFCSRP ILDSRGKKIW ELVVCDASLS 120
  121 LQVTKYFPNN VINSITLKDA IVTITQDLGV PLPEKIRFFR SQMQTIITKA CKELAIKAVP 180
  181 SKRCLSLFLW LQERYDTVYT RHPGFQKGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPLLSLDNPF PMNLPENLFG EKWAFVQLPY SAVREEISDF DEKFVFGASL DLDLLGIEVD  60
   61 ENTLIPGLSV ATSRAKPLAA WMNGLEVCSI EADSSKGCLI LSVGIATRYV YATYKKTPVT 120
  121 TDEAEAWESA KKTSGGLHFL AIQDDLDSDD CVGFWLLIDL PPPPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle