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View Structure Prediction Details

Protein: gi|18398129, gi|...
Organism: Arabidopsis thaliana
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18398129, gi|....

Description E-value Query
Range
Subject
Range
gi|159466814, gi... - gi|33235189|emb|CAE17329.1| Tab2 protein [Chlamydomonas reinhardtii], gi|33235187|emb|CAE17328.1| Ta...
442.0 [0..40] [374..24]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLGFNTRR IQTPSLPRIP KPSSFTKPIK THHLFSSETL LKRCRFVSRS LPESSLSITK  60
   61 EQEVANEVEE DDPTSELSYL DPESDADSIK EWELDFCSRP ILDSRGKKIW ELVVCDASLS 120
  121 LQVTKYFPNN VINSITLKDA IVTITQDLGV PLPEKIRFFR SQMQTIITKA CKELAIKAVP 180
  181 SKRCLSLFLW LQERYDTVYT RHPGFQKGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPLLSLDNPF PMNLPENLFG EKWAFVQLPY SAVREEISDF DEKFVFGASL DLDLLGIEVD  60
   61 ENTLIPGLSV ATSRAKPLAA WMNGLEVCSI EADSSKGCLI LSVGIATRYV YATYKKTPVT 120
  121 TDEAEAWESA KKTSGGLHFL AIQDDLDSDD CVGFWLLIDL PPPPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle