| Protein: | NLP9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 894 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLP9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
872.0 | [0..1] | [894..1] |
|
|
710.0 | [0..27] | [891..25] |
|
|
687.0 | [0..1] | [887..1] |
|
|
676.0 | [0..1] | [891..1] |
|
|
667.0 | [0..32] | [890..70] |
|
|
665.0 | [0..34] | [872..248] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MENPSASRDN KGFCFPDIPV EEMDGWVKNL ISEEDMFSSS STSELMNFES FASWCNSPSA 60
61 ADILFTQYGL STSQSIIPFG GLEGSYACEK RPLDC
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [96-281] |
1 11 21 31 41 51
| | | | | |
1 TSVPRSLSHS LDEKMLKALS LFMEFSGEGI LAQFWTPIKT GDQYMLSTCD QAYLLDSRLS 60
61 GYREASRRFT FSAEANQCSY PGLPGRVFIS GVPEWTSNVM YYKTAEYLRM KHALDNEVRG 120
121 SIAIPVLEAS GSSCCAVLEL VTCREKPNFD VEMNSVCRAL QAVNLQTSTI PRRQYLSSNQ 180
181 KEALAE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-520] |
1 11 21 31 41 51
| | | | | |
1 IRDVLRAVCY AHRLPLALAW IPCSYSKGAN DELVKVYGKN SKECSLLCIE ETSCYVNDME 60
61 MEGFVNACLE HYLREGQGIV GKALISNKPS FSSDVKTFDI CEYPLVQHAR KFGLNAAVAT 120
121 KLRSTFTGDN DYILEFFLPV SMKGSSEQQL LLDSLSGTMQ RLCRTLKTVS DAESIDGTEF 180
181 GSRSVEMTNL PQATVSVGSF HTTFLDTDVN STRSTFSNIS SNKRNEMAGS QGTLQQEIS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [521-626] |
1 11 21 31 41 51
| | | | | |
1 GARRLEKKKS STEKNVSLNV LQQYFSGSLK DAAKSLGVCP TTLKRICRQH GIMRWPSRKI 60
61 NKVNRSLRKI QTVLDSVQGV EGGLKFDSVT GEFVAVGPFI QEFGTQ
|
| Detection Method: | |
| Confidence: | 33.161151 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [627-772] |
1 11 21 31 41 51
| | | | | |
1 KSLSSHDEDA LARSQGDMDE DVSVEPLEVK SHDGGGVKLE EDVETNHQAG PGSLKKPWTW 60
61 ISKQSGLIYS DDTDIGKRSE EVNKDKEDLC VRRCLSSVAL AGDGMNTRIE RGNGTVEPNH 120
121 SISSSMSDSS NSSGAVLLGS SSASLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [773-894] |
1 11 21 31 41 51
| | | | | |
1 QNWNQIRTHN NSGESGSSST LTVKATYRED TVRFKLDPYV VGCSQLYREV AKRFKLQEGA 60
61 FQLKYLDDEE EWVMLVTDSD LHECFEILNG MRKHTVKFLV RDIPNTAMGS SAGSNGYLGT 120
121 GT
|
| Detection Method: | |
| Confidence: | 18.09691 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
