Protein: | gi|6850833, gi|1... |
Organism: | Arabidopsis thaliana |
Length: | 566 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6850833, gi|1....
Description | E-value | Query Range |
Subject Range |
|
677.0 | [0..1] | [564..31] |
Region A: Residues: [1-82] |
1 11 21 31 41 51 | | | | | | 1 MLLFVPNDPK SDLKLKVQTH NIKSQKYTKE GSNKPPWLNL TSKQGRSHIF EFENYPDMHA 60 61 CRDFITKALA KCEEEPNKLV VL |
Detection Method: | ![]() |
Confidence: | 15.69897 |
Match: | 1pfjA |
Description: | Solution structure of the N-terminal PH/PTB domain of the TFIIH P62 subunit |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 0.597587183571285 | bayes_pls_golite062009 |
protein binding | 0.29116370406325 | bayes_pls_golite062009 |
Region A: Residues: [83-147] |
1 11 21 31 41 51 | | | | | | 1 TPAEQLSMAE FELRFKLLRE NSELQKLHKQ FVESKVLTED EFWSTRKKLL GKDSIRKSKQ 60 61 QMGLK |
Detection Method: | ![]() |
Confidence: | 13.045757 |
Match: | 2diiA |
Description: | No description for 2diiA was found. |
Region A: Residues: [148-263] |
1 11 21 31 41 51 | | | | | | 1 SMMVSGIKPS TDGRTNRVTF NLTSEIIFQI FAEKPAVRQA FINYVPKKMT EKDFWTKYFR 60 61 AEYLYSTKNT AVAAAEAAED EELAVFLKPD EILAQEARQK MRRVDPTLDM DADEGD |
Detection Method: | ![]() |
Confidence: | 1.97 |
Match: | 1x3aA |
Description: | Solution structure of the BSD domain of human Synapse associated protein 1 |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [264-317] |
1 11 21 31 41 51 | | | | | | 1 DYTHLMDHGI QRDGTNDIIE PQNDQLKRSL LQDLNRHAAV VLEGRCIIDV QSED |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [318-486] |
1 11 21 31 41 51 | | | | | | 1 TRIVAEALTR AKQVSKADGE ITKDANQERL ERMSRATEME DLQAPQNFPL APLSIKDPRD 60 61 YFESQQGNIL SEPRGAKASK RNVHEAYGLL KESILVIRMT GLSDPLIKPE VSFEVFSSLT 120 121 RTISTAKNIL GKNPQESFLD RLPKSTKDEV IHVGKLKDAM SNTYSLLDV |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [487-566] |
1 11 21 31 41 51 | | | | | | 1 SYGILLQIFF SEVVVETYSI WSSVYGFRNI IPNVNQAMKQ SVQSDLRHQV SLLVRPMQQA 60 61 LDAAFQHYES DLQRRTAKIT |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.