| Protein: | ARFN_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFN_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
705.0 | [0..1] | [596..1] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MESGNVVNTQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP QGHIELVEAS 60
61 TREELNELQP ICDFPSKLQC RVIAIQLKVE NNSDETYAEI TLM
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.314 | N/A | N/A | b.124.1 | Hypothetical protein Aq 1857 |
| View | Download | 0.314 | N/A | N/A | b.124.1 | Hypothetical protein Aq 1857 |
| View | Download | 0.286 | N/A | N/A | b.124.1 | Hypothetical protein Aq 1857 |
| View | Download | 0.252 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.252 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.216 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.203 | N/A | N/A | a.118.8 | TPR-like |
|
Region A: Residues: [104-237] |
1 11 21 31 41 51
| | | | | |
1 PDTTQVVIPT QNQNQFRPLV NSFTKVLTAS DTSVHGGFSV PKKHAIECLP PLDMSQPLPT 60
61 QEILAIDLHG NQWRFRHIYR GTAQRHLLTI GWNAFTTSKK LVEGDVIVFV RGETGELRVG 120
121 IRRAGHQQGN IPSS
|
| Detection Method: | |
| Confidence: | 35.154902 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [238-339] |
1 11 21 31 41 51
| | | | | |
1 IVSIESMRHG IIASAKHAFD NQCMFIVVYK PRSSQFIVSY DKFLDVVNNK FNVGSRFTMR 60
61 FEGDDFSERR SFGTIIGVSD FSPHWKCSEW RSLEVQWDEF AS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.768 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.736 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.657 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.657 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.633 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.630 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.630 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.616 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.607 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.606 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
|
Region A: Residues: [340-470] |
1 11 21 31 41 51
| | | | | |
1 FPRPNQVSPW DIEHLTPWSN VSRSSFLKNK RSREVNEIGS SSSHLLPPTL TQGQEIGQQS 60
61 MATPMNISLR YRDITEDAMT PSRLLMSYPV QPMAKLNYNN VVTPIEENIT TNAVASFRLF 120
121 GVSLATPSVI K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [471-605] |
1 11 21 31 41 51
| | | | | |
1 DPVEQIGLEI SRLTQEKKFG QSQILRSPTE IQSKQFSSTR TCTKVQMQGV TIGRAVDLSV 60
61 LNGYDQLILE LEKLFDLKGQ LQARNQWEIA FTNNEEDKML VGEDPWPEFC NMVKKIFIYS 120
121 KEEVKNLKSR KSLSS
|
| Detection Method: | |
| Confidence: | 1.21 |
| Match: | 1wj6A |
| Description: | Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 |
Matching Structure (courtesy of the PDB): |
|
