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View Structure Prediction Details

Protein: ARFW_ARATH
Organism: Arabidopsis thaliana
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFW_ARATH.

Description E-value Query
Range
Subject
Range
ARFN_ARATH - Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2
358.0 [0..1] [222..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGNVVNVQ SELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP QGHIELVEAS  60
   61 TREELNELQP NCDLPSKLQC RVIAIHLKVE NNSDETYVEI TL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.333 N/A N/A d.17.1 Cystatin/monellin
View Download 0.333 N/A N/A d.17.1 Cystatin/monellin
View Download 0.241 N/A N/A a.165.1 Myosin phosphatase inhibitor 17kDa protein, CPI-17

Predicted Domain #2
Region A:
Residues: [103-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDTTQVVIP TENENQFRPI VNSFTKVLTA SDTSAQGEFS VPCKHAIECL PPLDMSQPIP  60
   61 AQELIAIDLH GNQWRFKHSY RVPRGDTTGW NAFTTSKKLV VGDVIVFARG ETGELRVGIR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.522879
Match: 1widA
Description: Solution Structure of the B3 DNA-Binding Domain of RAV1
Matching Structure (courtesy of the PDB):

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