YRC Public Data Repository - Protein Structure Prediction

Protein:	SO2928
Organism:	Shewanella oneidensis
Length:	227 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SO2928.

Description	E-value	Query Range	Subject Range
gi\|78504220, gi\|... - gi\|78688044\|ref\|ZP_00852770.1\| Arylesterase [Shewanella sp. ANA-3], gi\|78504220\|gb\|EAP17787.1\| Aryle...	215.0	[0..1]	[227..1]
gi\|82721139, gi\|... - gi\|82741479\|ref\|ZP_00904199.1\| Arylesterase [Shewanella sp. W3-18-1], gi\|82721139\|gb\|EAP55985.1\| Ary...	200.0	[0..1]	[227..1]
gi\|124550111, gi... - gi\|124550111\|ref\|ZP_01707934.1\| lipolytic enzyme, G-D-S-L [Shewanella putrefaciens 200], gi\|12450759... gi\|77809996, gi\|... - gi\|77815032\|ref\|ZP_00814277.1\| Arylesterase [Shewanella putrefaciens CN-32], gi\|77809996\|gb\|EAO94383...	199.0	[0..1]	[227..1]
gi\|68518304, gi\|... - gi\|68543999\|ref\|ZP_00583679.1\| Arylesterase [Shewanella baltica OS155], gi\|68518304\|gb\|EAN41885.1\| A...	196.0	[0..1]	[227..1]
gi\|113951013, gi... - gi\|113951013\|ref\|ZP_01436614.1\| Arylesterase [Shewanella baltica OS195], gi\|113906569\|gb\|EAU25320.1\|...	190.0	[0..1]	[227..1]
gi\|77384238, gi\|... - gi\|77460235\|ref\|YP_349742.1\| lipolytic protein [Pseudomonas fluorescens Pf0-1], gi\|77384238\|gb\|ABA75...	182.0	[0..29]	[225..1]
gi\|113969820, gi... - gi\|113969820\|ref\|YP_733613.1\| arylesterase [Shewanella sp. MR-4], gi\|113884504\|gb\|ABI38556.1\| Aryles...	180.0	[0..29]	[227..1]
gi\|114047048, gi... - gi\|114047048\|ref\|YP_737598.1\| arylesterase [Shewanella sp. MR-7], gi\|113888490\|gb\|ABI42541.1\| Aryles...	180.0	[0..29]	[227..1]
gi\|11288326 - pir\|\|A82418 arylesterase VCA0783 [imported] - Vibrio cholerae (strain N16961 serogroup O1) gi\|227015157, gi... - gi\|227119707\|ref\|YP_002821602.1\| arylesterase [Vibrio cholerae O395], gi\|227015157\|gb\|ACP11366.1\| ar... gi\|153823216, gi... - gi\|153823216\|ref\|ZP_01975883.1\| arylesterase [Vibrio cholerae B33], gi\|126519255\|gb\|EAZ76478.1\| aryl... gi\|9658207, gi\|1... - gi\|9658207\|gb\|AAF96681.1\| arylesterase [Vibrio cholerae O1 biovar eltor str. N16961], gi\|15601538\|re... gi\|227011491, gi... - gi\|227812349\|ref\|YP_002812359.1\| arylesterase [Vibrio cholerae M66-2], gi\|227011491\|gb\|ACP07702.1\| a... gi\|124118127, gi... - gi\|153223577\|ref\|ZP_01953955.1\| arylesterase [Vibrio cholerae MAK 757], gi\|124118127\|gb\|EAY36870.1\| ... gi\|121728956, gi... - gi\|121728956\|ref\|ZP_01681961.1\| arylesterase [Vibrio cholerae V52], gi\|121628765\|gb\|EAX61230.1\| aryl... gi\|153820367, gi... - gi\|153820367\|ref\|ZP_01973034.1\| arylesterase [Vibrio cholerae NCTC 8457], gi\|126509091\|gb\|EAZ71685.1... gi\|254849942, gi... - gi\|254849942\|ref\|ZP_05239292.1\| arylesterase [Vibrio cholerae MO10], gi\|254845647\|gb\|EET24061.1\| ary...	177.0	[0..34]	[225..20]
gi\|91775603, gi\|... - gi\|91775603\|ref\|YP_545359.1\| arylesterase [Methylobacillus flagellatus KT], gi\|91709590\|gb\|ABE49518....	176.0	[0..29]	[227..2]

Back

Predicted Domain #1

Region A:
Residues: [1-227]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFETTLD IGSFLYKSFL RQSHRCKPMA KALVICILLS LCVTTPVQAA KVLILGDSLG  60
   61 ASYGMSEQLG WVALLQKNLP EHDFTNGSVS GETTAGGLRR LPALLDSVAP DLVVVELGGN 120
  121 DGLRGFPPTQ LKNNLTQIIT LAKNSGAKVL LTEIMVPPNY GPRYTQKFTE VYQEIAKDED 180
  181 IPLIPFFMQE IAPYPELMQR DGIHPNEKAQ DKIANWMQPW IEKALTQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.0
Match:	1jrlA
Description:	Thioesterase I, TAP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity	2.54040544751787	bayes_pls_golite062009
catalytic activity	1.15974340242656	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.329995026054361	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: