YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SO2928

General Information:
Name(s) found: SO2928 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • acyl-CoA thioesterase I putative [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 227 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFETTLD IGSFLYKSFL RQSHRCKPMA KALVICILLS LCVTTPVQAA KVLILGDSLG  60
   61 ASYGMSEQLG WVALLQKNLP EHDFTNGSVS GETTAGGLRR LPALLDSVAP DLVVVELGGN 120
  121 DGLRGFPPTQ LKNNLTQIIT LAKNSGAKVL LTEIMVPPNY GPRYTQKFTE VYQEIAKDED 180
  181 IPLIPFFMQE IAPYPELMQR DGIHPNEKAQ DKIANWMQPW IEKALTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 41.0 Thioesterase I, TAP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.54040544751787 bayes_pls_golite062009
  • catalytic activity
    		•  1.15974340242656 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.329995026054361 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle