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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42571109
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLPLFQF ILFLLLLLLS RTVYAYLIGV GSYDITGPAA DVNMMGYANS DQIASGIHFR  60
   61 LRARAFIVAE PQGNRVVFVN LDACMASQIV TIKVLERLKA RYGELYTEKN VAISGIHTHA 120
  121 GPGGYLQYVT YIVTSLGFVR QSFDVVVNGI EQSIVQAHES LRPGSAFVNK GDLLDAGVNR 180
  181 SPSSYLNNPA AERSKYKYDV DKEMTLVKFV DSQLGPTGSF NWFATHGTSM SRTNSLISGD 240
  241 NKGAAARFME DWFENGQKNS VSSRNIPRRV STIVSDFSRN RESYPFLELP NVAILYIAVA 300
  301 ERLMWKVMVL FYFVSESRLL DIAATYKSSR GHSVDKSLDV KTRVRNGSKR KFVSAFCQSN 360
  361 CGDVSPNTLG TFCIDTGLPC DFNHSTCNGQ NELCYGRGPG YPDEFESTRI IGEKQFKMAV 420
  421 ELFNKATEKL QGKIGYQHAY LDFSNLDVTV PKAGGGSETV KTCPAAMGFG FAAGTTDGPG 480
  481 AFDFKQGDDQ GNVFWRLVRN VLRTPGPEQV QCQKPKPILL DTGEMKEPYD WAPSILPIQI 540
  541 LRIGQLVILS VPGEFTTMAG RRLRDAIKSF LISSDPKEFS NNMHVVIAGL TNTYSQYIAT 600
  601 FEEYEVQRYE GASTLYGRHT LTAYIQEFKK LATALVNGLT LPRGPQPPDL LDKQISLLSP 660
  661 VVVDSTPLGV KFGDVKADVP PKSTFRRGQQ VNATFWSGCP RNDLMTEGSF AVVETLREGG 720
  721 KWAPVYDDDD FSLKFKWSRP AKLSSESQAT IEWRVPESAV AGVYRIRHYG ASKSLFGSIS 780
  781 SFSGSSSAFV VV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle