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Protein Overview: gi|42571109

General Information:
Name(s) found: gi|42571109 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42571109|ref|NP_973628.1| ceramidase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 792 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLPLFQF ILFLLLLLLS RTVYAYLIGV GSYDITGPAA DVNMMGYANS DQIASGIHFR  60
   61 LRARAFIVAE PQGNRVVFVN LDACMASQIV TIKVLERLKA RYGELYTEKN VAISGIHTHA 120
  121 GPGGYLQYVT YIVTSLGFVR QSFDVVVNGI EQSIVQAHES LRPGSAFVNK GDLLDAGVNR 180
  181 SPSSYLNNPA AERSKYKYDV DKEMTLVKFV DSQLGPTGSF NWFATHGTSM SRTNSLISGD 240
  241 NKGAAARFME DWFENGQKNS VSSRNIPRRV STIVSDFSRN RESYPFLELP NVAILYIAVA 300
  301 ERLMWKVMVL FYFVSESRLL DIAATYKSSR GHSVDKSLDV KTRVRNGSKR KFVSAFCQSN 360
  361 CGDVSPNTLG TFCIDTGLPC DFNHSTCNGQ NELCYGRGPG YPDEFESTRI IGEKQFKMAV 420
  421 ELFNKATEKL QGKIGYQHAY LDFSNLDVTV PKAGGGSETV KTCPAAMGFG FAAGTTDGPG 480
  481 AFDFKQGDDQ GNVFWRLVRN VLRTPGPEQV QCQKPKPILL DTGEMKEPYD WAPSILPIQI 540
  541 LRIGQLVILS VPGEFTTMAG RRLRDAIKSF LISSDPKEFS NNMHVVIAGL TNTYSQYIAT 600
  601 FEEYEVQRYE GASTLYGRHT LTAYIQEFKK LATALVNGLT LPRGPQPPDL LDKQISLLSP 660
  661 VVVDSTPLGV KFGDVKADVP PKSTFRRGQQ VNATFWSGCP RNDLMTEGSF AVVETLREGG 720
  721 KWAPVYDDDD FSLKFKWSRP AKLSSESQAT IEWRVPESAV AGVYRIRHYG ASKSLFGSIS 780
  781 SFSGSSSAFV VV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] MSA 1.058951 View MSA. No confident structure predictions are available.
    2 View Details [196..375] deduced N/A No confident structure predictions are available.
    3 View Details [376..555] MSA 1.042972 View MSA. No confident structure predictions are available.
    4 View Details [556..657] deduced N/A No confident structure predictions are available.
    5 View Details [658..792] MSA 5.045954 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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