YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125554411
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVQLSGAG VAAVAFTKNG ASSFDGLRLA PPSVRVCSSR RPSRSLVVKA ATVVTPKYTS  60
   61 LKPLGDRVLV KLGAAEEKTV GGILLPSTAQ SKPQGGEVVA VGEGRTIGDK KVEVSLQIGA 120
  121 EVVYSKYAGT EVQFNDTKHL ILKEDDIIGV LETDDVKDMK PLNDRVLIKV AEAEDKTAGG 180
  181 LILTETTKEK PSIGTVVAVG PGPLDDEGKR QPLSVSAGST VMYSKYAGSE FKGADGTNYI 240
  241 VLRVSDVMAV LS

Type	Start	End	Confidence
Signal Peptide	1	23	0.84
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	252	0.99