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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|156072126
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLFFNKLK NVGKKIKINF IQILIIFLVY VNLDFFKSNI NVKAIHTKKN LFIPVSNEIF  60
   61 YFKKNVLIKK RNKEKRYTHS KNKGSNIFLN LNEENDNTVK ERKKKIKYPE IGEYNDDVNH 120
  121 NKNNDNNGDD SESHLNDQGK CKFSDLSEIN KNIVEFLENK KGIKYMTKIQ SQSFKPIYEG 180
  181 KDIIGRSETG SGKTLAFALP LVEKLYKMKT SNEKFEEENG SHEEDQKKNI YDDVDNDNNY 240
  241 DNFSYGKKYQ NREHNKDPSI LVLEPTRELS KQVENTFKEI SQFYNFNIMS IYGGESYTYQ 300
  301 ENKLRKGIDI LTGTPGRIID HIEKKNLSLQ NIKYVVLDEA DEMLNLGFTH DIERILSNIN 360
  361 LKEAQVLLYS ATTPSWIKDI SSKYLKNPFC IDVVDSSNKT AKNIKHIAIK TPYDIKEKAL 420
  421 LLEDIILVKS NGGQVIIFTR TKLEADILCS EGSFKSLSFA VLHGNIAQST REYTMQRFRQ 480
  481 GMFQILIATD IASRGLDISN VDLVIQCFPP NYSAVYIHRA GRTGRANKKG TSLVLYSNED 540
  541 KQDLIKIEKN CGIKFNMETL PNNEQVFHCA SAIASKKVEN VNKEILPFFH DTAKELINKS 600
  601 NSLKIDQIEL ISRCLAIIAK KEHIKKRSLI NGLSETVTLN FINKNRKWSS EADIVYWVNK 660
  661 LSNELNVNTF NKILQIKIDN KDRASSFFDI NENLAELFLQ NFKTMSKIEY RKMFDLSVAQ 720
  721 TIPEHVDLTI DYQPHTSRYQ YRKKNYSYRR RPSYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle