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Protein Overview: gi|156072126

General Information:
Name(s) found: gi|156072126 [NCBI NR]
Description(s) found:
  • gi|156072126|gb|ABU45414.1| DEAD-box helicase 5 [Plasmodium falciparum] [NCBI NR]
    • Organism: Plasmodium falciparum
    Length: 755 amino acids

    Gene Ontology:
    Cellular Component: apicoplast [ISSLink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLFFNKLK NVGKKIKINF IQILIIFLVY VNLDFFKSNI NVKAIHTKKN LFIPVSNEIF  60
   61 YFKKNVLIKK RNKEKRYTHS KNKGSNIFLN LNEENDNTVK ERKKKIKYPE IGEYNDDVNH 120
  121 NKNNDNNGDD SESHLNDQGK CKFSDLSEIN KNIVEFLENK KGIKYMTKIQ SQSFKPIYEG 180
  181 KDIIGRSETG SGKTLAFALP LVEKLYKMKT SNEKFEEENG SHEEDQKKNI YDDVDNDNNY 240
  241 DNFSYGKKYQ NREHNKDPSI LVLEPTRELS KQVENTFKEI SQFYNFNIMS IYGGESYTYQ 300
  301 ENKLRKGIDI LTGTPGRIID HIEKKNLSLQ NIKYVVLDEA DEMLNLGFTH DIERILSNIN 360
  361 LKEAQVLLYS ATTPSWIKDI SSKYLKNPFC IDVVDSSNKT AKNIKHIAIK TPYDIKEKAL 420
  421 LLEDIILVKS NGGQVIIFTR TKLEADILCS EGSFKSLSFA VLHGNIAQST REYTMQRFRQ 480
  481 GMFQILIATD IASRGLDISN VDLVIQCFPP NYSAVYIHRA GRTGRANKKG TSLVLYSNED 540
  541 KQDLIKIEKN CGIKFNMETL PNNEQVFHCA SAIASKKVEN VNKEILPFFH DTAKELINKS 600
  601 NSLKIDQIEL ISRCLAIIAK KEHIKKRSLI NGLSETVTLN FINKNRKWSS EADIVYWVNK 660
  661 LSNELNVNTF NKILQIKIDN KDRASSFFDI NENLAELFLQ NFKTMSKIEY RKMFDLSVAQ 720
  721 TIPEHVDLTI DYQPHTSRYQ YRKKNYSYRR RPSYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] MSA 1.655997 View MSA. No confident structure predictions are available.
    2 View Details [141..221] PSI-BLAST 51.045757 Putative DEAD box RNA helicase
    3 View Details [222..326] PSI-BLAST 36.39794 Nucleotide excision repair enzyme UvrB
    4 View Details [327..755] PSI-BLAST 42.0 Pre-protein croslinking domain of SecA; Helical scaffold and wing domains of SecA; Translocation ATPase SecA, nucleotide-binding domains


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle