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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7522461, gi|1...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISSHRPEASS LLDFLVKDQK KSGDISLHTK FNLYVDDLLK KSEKGQIKKF INDIKKDLAT  60
   61 ESQLPLSAPF KDESTRTMTD PQVLAYIHQS MPYQYASLYS VLTDLKIVNS DVSCKSQHIL 120
  121 DCGKGPGIGA LASYSVFPTP NSVSIVEENP FLKKIIYDIH HNIYPSTSPN PTSPVTLNRL 180
  181 PLGKKDSYTL VIASNKLLEM KSEKELFDYL RSLWSLVSND GGLLVLCERG TKRGFSLIQR 240
  241 ARTFLLQKSK NTSDKQFNAH IVAPCPHDGR CPIDIENGVR ANICSFKQHF FLSPFSRLYV 300
  301 PRSHRRSSDR SHYSYVVIQK GITRPLNNTT QRFKNDEDLL ENVNVTSPTL KNWPRIIRPP 360
  361 LKRDGHVIID VCDSDARLRR NIVPKSQGKL AYRLARKSAW GDLFPLEGKV QSTSPSSKIT 420
  421 KHLKDASSTY SINPPSYNKP KVERNTTADP IFVGKRFYST NRHKAFSRFA DFNSHRFPCI 480
  481 FTSFSCYNCI SGTRKYSRQY SRDKFHYNQR TTIYYLVAIS IFALGLTYAA VPLYRLFCSK 540
  541 TGYGGTLNTD QSRMNAERMV PRKDNKRIRV TFNGDVAGNL SWKLWPQQRE IYVLPGETAL 600
  601 GFYTAENTSD HDIVGVATYN IVPGQAAVYF SKVACFCFEE QKLDAHEKVD LPVFFFIDPE 660
  661 FADDPNMKDI DDILLSYTFF EARYDTNGNL LTKLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle