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Protein Overview: gi|18655431, gi|...

General Information:
Name(s) found: gi|18655431 [NCBI NR]
gi|18655430 [NCBI NR]
gi|18655429 [NCBI NR]
gi|11513546 [NCBI NR]
gi|11513545 [NCBI NR]
gi|11513544 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|18655431|pdb|1JH7|A Chain A, Semi-Reduced Inhibitor-Bound Cyclic Nucleotide Phosphodiesterase From Arabidopsis Thaliana [NCBI NR]
  • gi|18655430|pdb|1JH6|B Chain B, Semi-Reduced Cyclic Nucleotide Phosphodiesterase From Arabidopsis Thaliana [NCBI NR]
  • gi|18655429|pdb|1JH6|A Chain A, Semi-Reduced Cyclic Nucleotide Phosphodiesterase From Arabidopsis Thaliana [NCBI NR]
  • gi|11513546|pdb|1FSI|C Chain C, Crystal Structure Of Cyclic Nucleotide Phosphodiesterase Of Appr>p From Arabidopsis Thaliana [NCBI NR]
  • gi|11513545|pdb|1FSI|B Chain B, Crystal Structure Of Cyclic Nucleotide Phosphodiesterase Of Appr>p From Arabidopsis Thaliana [NCBI NR]
  • gi|11513544|pdb|1FSI|A Chain A, Crystal Structure Of Cyclic Nucleotide Phosphodiesterase Of Appr>p From Arabidopsis Thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVKKDVYS VWALPDEESE PRFKKLMEAL RSEFTGPRFV PHVTVAVSAY LTADEAKKMF  60
   61 ESACDGLKAY TATVDRVSTG TFFFQCVFLL LQTTPEVMEA GEHCKNHFNC STTTPYMPHL 120
  121 SLLYAELTEE EKKNAQEKAY TLDSSLDGLS FRLNRLALCK TDTEDKTLET WETVAVCNLN 180
  181 PGSHHHHHH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|18655431, gi|... gi|47169278, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 30.30103 tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.372436499192166 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle