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Protein Overview: gi|56121918, gi|...

General Information:
Name(s) found: gi|60543353 [NCBI NR]
gi|56121918 [NCBI NR]
gi|42565501 [NCBI NR]
Description(s) found:
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  • gi|60543353|gb|AAX22274.1| At3g44160 [Arabidopsis thaliana] [NCBI NR]
  • gi|56121918|gb|AAV74240.1| At3g44160 [Arabidopsis thaliana] [NCBI NR]
  • gi|42565501|ref|NP_190002.2| chloroplast outer membrane protein-related [Arabidopsis thaliana] [NCBI NR]
  • chloroplast outer membrane protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Chloroplast outer membrane protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | chloroplast outer membrane protein-related | chr3:15900212-15902801 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At3g44160 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Outer membrane OMP85 family protein | chr3:15889225-15891814 REVERSE LENGTH=362 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At3g44160 OS=Arabidopsis thaliana GN=At3g44160 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: outer membrane [IEA]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAQKSIHAG RAKIDVNVDF THKLCTSLMF PAFRDTSSPL SLVIGSLCIK HPNLFGGSEK  60
   61 LDVSWDKGLY DSNVLVAFRR PRPEWRPQQC FFIQHSLSPE IGVHGTPVDN FSRSGSGGVN 120
  121 LSKLALGLDL SEPASSKWSS TTSIKFEHVR PINDDGRAIT RDLDGFPITC SGNTHDSMVV 180
  181 LKQESRFAKA TDQGLSHFSM QIEQGIPVVS KWLIFNRFKF VASKGVRFGP AFLLASLTGG 240
  241 SIVGDMAPYQ AFAIGGLGSV RGYGEGAVGS GRSCLVANTE LALPLNKMTE GTIFLDCGTD 300
  301 LGSSRLVPGN PSMRQGKPGF GYGFGYGLRF KSPLGHLQVD YAINAFNQKT LYFGVTNLAS 360
  361 ST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 25.69897 No description for 2qdzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle