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Protein Overview: gi|218188395

General Information:
Name(s) found: gi|218188395 [NCBI NR]
Description(s) found:
  • gi|218188395|gb|EEC70822.1| hypothetical protein OsI_02298 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 768 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIQDIGVS AAINILSAIT FLLAFAFLRL QPINDRVYFP KWYLKGARES PSHGGAFVRK  60
   61 FVNLDMRSYL KVLSWMPAAL KMPEDELISH AGLDSAVYLR IYLIGLKIFA PITVLAFIIL 120
  121 VPVNWTNITL QSSKVQHSDI DKLSISNIPV GSKRFAAHLT MAYVFTFWTC YVLLREYEIV 180
  181 ATMRLRFLAS EKRRPDQFTV LVRNIPPDPD ESIGELVEHF FLVNHPDHYL THQVVYNANK 240
  241 LDKMVKEKKK MQNWLDYYQL KYERNTSQRP TTKTGFLGCF GSKVDAIEYY TSEIERIEKE 300
  301 ETDERGKIMK DPKSVVPAAF VSFRSRWGAA VCAQTQQTSN PTVWLTEWAP EPRDVYWDNL 360
  361 SIPFVYLTIR RLIIAVAFFF LNFFYVLPIA FVQSLANIEG IEKAAPFLKP LIEMRTIKSF 420
  421 IQGFLPGIAL KIFLILLPSI LMFMSKVEGL TSVSSLERRS AFKYYIFLFF NVFLGSIIAG 480
  481 SALEQLKTFL HQSANEIPRT IGEAIPMKAT FFITYVMVDG WAGVAGEILR LKPLIIFHLK 540
  541 NFFLVKTEKD REEAMDPGSI GFDSNEPQIQ LYFLLGLVYA VVTPFLLPFI LIFFGLAYVV 600
  601 YRHQIINVYN QEYESAAAFW PSVHGRIIVA LIVSQLLLLG LLSTKGAGQS TPVLLVLPVV 660
  661 TFYFYKYCKN RYEPAFVEYP LQDAMRKDTL ERAREPGFDL KGYLMNAYIH PVFKGDEDDE 720
  721 KFSISDEPEA EQVLVATKRQ SRRNTPVPSK YNGSESPSLA EIVNDQRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 1.174981 View MSA. No confident structure predictions are available.
    2 View Details [189..361] FFAS03 1.22 Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
    3 View Details [362..545] MSA 6.388995 View MSA. No confident structure predictions are available.
    4 View Details [546..644] MSA 7.391995 View MSA. No confident structure predictions are available.
    5 View Details [645..768] MSA 1.250996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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