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Protein Overview: gi|52695972, gi|...

General Information:
Name(s) found: gi|52695974 [NCBI NR]
gi|52695973 [NCBI NR]
gi|52695972 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|52695974|pdb|1U2M|C Chain C, Crystal Structure Of Skp [NCBI NR]
  • gi|52695973|pdb|1U2M|B Chain B, Crystal Structure Of Skp [NCBI NR]
  • gi|52695972|pdb|1U2M|A Chain A, Crystal Structure Of Skp [NCBI NR]
    • Organism: Escherichia coli
    Length: 143 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GXADKIAIVN XGSLFQQVAQ KTGVSNTLEN EFKGRASELQ RXETDLQAKX KKLQSXKAGS  60
   61 DRTKLEKDVX AQRQTFAQKA QAFEQDRARR SNEERGKLVT RIQTAVKSVA NSQDIDLVVD 120
  121 ANAVAYNSSD VKDITADVLK QVK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. LGUL_ECOLI gi|134105085, gi... gi|189095939, gi... gi|52695972, gi|... gi|60594470, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 23.69897 Crystal structure of the periplasmic chaperone Skp

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.90264670077178 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.7887148828099 bayes_pls_golite062009
  • protein binding
    		•  0.404450175883241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle