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Protein Overview: gi|157349300, gi...

General Information:
Name(s) found: gi|225453839 [NCBI NR]
gi|20385586 [NCBI NR]
gi|157349300 [NCBI NR]
Description(s) found:
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  • gi|225453839|ref|XP_002277624.1| PREDICTED: MADS-box protein 3 [Vitis vinifera] [NCBI NR]
  • gi|20385586|gb|AAM21343.1|AF373602_1 MADS-box protein 3 [Vitis vinifera] [NCBI NR]
  • gi|157349300|emb|CAO24446.1| unnamed protein product [Vitis vinifera] [NCBI NR]
  • MADS-box protein 3 [Vitis vinifera] [nrdb_11152004_Chlamydomonas]
    • Organism: Vitis vinifera
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA  60
   61 GTTKTLERYQ RVCYTPQDNN MECETQSWYQ EVSKLKAKYE SLQRTQRHLL GEDLGPLSVK 120
  121 ELQNLEKQLE GALAQARQRK TQMMIEQMED LRRKERQLGD LNKQLKLKLE AEGQSLKAIQ 180
  181 GSWNPSTATA GNSSFPVHPS QSNPMDCEPE PILQIGYHHY VPAEGPSVSK SMAGESNFIQ 240
  241 GWVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 21.30103 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [81..244] Pfam 25.267606 No description for PF01486.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle