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Protein Overview: gi|36786133, gi|...

General Information:
Name(s) found: gi|37526701 [NCBI NR]
gi|36786133 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|37526701|ref|NP_930045.1| NAD-dependent deacetylase [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36786133|emb|CAE15185.1| CobB protein [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRRRLSRL GRLRKVKRLR HQRFRSRIFY RDNRLALNMK KPYIVVLTGA GISAESGIRT  60
   61 FRSSDGLWEE HRVEDVATPE GFQKDPELVQ AFYNARRHQL QQSEIKPNVA HYALAALEHE 120
  121 LGDNFLLITQ NIDDLHERAG SYRTVHMHGE LFKIRCCQSG QVFEWTDDLT TDERCHCCQF 180
  181 PSPLRPHVVW FGEMPLEMEQ IYSALAQADI FIAIGTSGHV YPAAGFVHEA KLAGAHTVEL 240
  241 NLEPSQVESL FDEKHYGPAS KIVDEYARRL IDSIKEFKAD LTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 77.30103 Structure and substrate binding properties of cobB, a Sir2 homolog protein deacetylase from Eschericia coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • NAD+ ADP-ribosyltransferase activity
    		•  4.03377448635905 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  3.62931364715038 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  3.62931364715038 bayes_pls_golite062009
  • histone deacetylase activity
    		•  3.33234624338308 bayes_pls_golite062009
  • protein deacetylase activity
    		•  3.3158908416347 bayes_pls_golite062009
  • deacetylase activity
    		•  2.93661150106825 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.75247092617964 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.35219834199205 bayes_pls_golite062009
  • catalytic activity
    		•  1.1096503360938 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.798062126041325 bayes_pls_golite062009
  • DNA binding
    		•  0.76914567174665 bayes_pls_golite062009
  • binding
    		•  0.725903081591757 bayes_pls_golite062009
  • NAD(P)+-protein-arginine ADP-ribosyltransferase activity
    		•  0.6957216362751 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.59989665970892 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.535572217873276 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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