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Protein Overview: CLPP_PHOLL

General Information:
Name(s) found: CLPP_PHOLL [Swiss-Prot]
Description(s) found:
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  • gi|37527729|ref|NP_931074.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36787165|emb|CAE16241.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp) [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • ATP-dependent Clp protease proteolytic subunit OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) GN=clpP PE=3 SV=1 [Swiss-Prot]
  • ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp) [Photorhabdus luminescens subsp. laumondii TTO1]gi|37527729|ref|NP_931074.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat [nrdb_11152004_Chlamydomonas]
  • ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp) [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
  • ATP-dependent Clp protease proteolytic subunit [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSDKRDQY APHMALVPMV VEQTTRGERS YDIYSRLLKE RIIFLTGQVE DHMANLVAAQ  60
   61 MLFLEAENPE KDIFLYINSP GGVITAGMSI YDTMQFIKPD VSTICMGQAC SMGAFLLTAG 120
  121 AKGKRICLPN SRVMIHQPLG GFQGQATDIE IHAQEILKVK SRMNELMAKH TGRPIEEIAK 180
  181 DTERDRFLSA DEAVEYGLVD KIFTHRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] PSI-BLAST 71.0 Clp protease, ClpP subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.621229080200493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.620657548610719 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • binding
    		•  0.367666848528835 bayes_pls_golite062009
  • ligase activity
    		•  0.32092496884003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle