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Protein Overview: gi|145357576, gi...

General Information:
Name(s) found: gi|238481199 [NCBI NR]
gi|23506103 [NCBI NR]
gi|15982840 [NCBI NR]
gi|145357576 [NCBI NR]
Description(s) found:
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  • gi|238481199|ref|NP_001154693.1| iqd2 (IQ-domain 2); calmodulin binding [Arabidopsis thaliana] [NCBI NR]
  • gi|23506103|gb|AAN28911.1| At5g03040/F15A17_70 [Arabidopsis thaliana] [NCBI NR]
  • gi|15982840|gb|AAL09767.1| AT5g03040/F15A17_70 [Arabidopsis thaliana] [NCBI NR]
  • gi|145357576|ref|NP_568110.2| iqd2 (IQ-domain 2); calmodulin binding [Arabidopsis thaliana] [NCBI NR]
  • At5g03040/F15A17_70 [Arabidopsis thaliana]gi|15982840|gb|AAL09767.1| AT5g03040/F15A17_70 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 AT5g03040/F15A17_70 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: IQD2 | IQD2 (IQ-domain 2); calmodulin binding | chr5:710378-712405 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g03040/F15A17_70 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g03040/F15A17_70 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: iqd2 | IQ-domain 2 | chr5:710380-712406 REVERSE LENGTH=461 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g03040/F15A17_70 OS=Arabidopsis thaliana GN=iqd2 PE=2 SV=1 [ARATH-contam.fasta]
  • AT5g03040/F15A17_70 OS=Arabidopsis thaliana GN=iqd2 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 461 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR  60
   61 VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV RRATPTRFAG KSNEEAAAIL 120
  121 IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM 180
  181 SEENQARQKQ LLQKHAKELA GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY 240
  241 SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS 300
  301 INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS 360
  361 VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA RLKPQSPLGG TTQENEGFTD 420
  421 KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] PSI-BLAST 62.0 No description for 2dfsA was found.
    2 View Details [79..461] PSI-BLAST 8.522879 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle