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Protein Overview: gi|24347427, gi|...

General Information:
Name(s) found: gi|24373206 [NCBI NR]
gi|24347427 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373206|ref|NP_717249.1| outer membrane protein OmpH [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347427|gb|AAN54693.1|AE015609_12 outer membrane protein OmpH [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 168 amino acids

    Gene Ontology:
    Cellular Component: cell outer membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKMVNRALV TLALLGAPLA AQAENIAVVD MGAVFEQLPQ REQIMQSLKS EFGDRMSEVQ  60
   61 KMQEEMRSLM EKQQRDGALM NDTQKTELVR KMEALKSEYQ LKGKALDEDL RRRQGEEQNK 120
  121 LLVKVQKAIN TIAEKEKYDL VLQRGAVIYV KPNADISGKV VEALSKGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 20.69897 Crystal structure of the periplasmic chaperone Skp

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.90264670077178 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.7887148828099 bayes_pls_golite062009
  • protein binding
    		•  0.404450175883241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle