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Protein Overview: gi|24348842, gi|...

General Information:
Name(s) found: gi|24374301 [NCBI NR]
gi|24348842 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374301|ref|NP_718344.1| UMP phosphatase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348842|gb|AAN55788.1|AE015715_7 nagD protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: amino sugar metabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIICDIDG VLLHDNKLIP GSDKFIQRIL EQGNPLVILT NYPVQTGKDL QNRLSAAGID  60
   61 VPEECFYTSA MATADFLKHQ EGSKAFVIGE GALTHELYKA GFTITDINPD FVIVGETRSY 120
  121 NWDMIHKAAG FVARGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSSWII 180
  181 RSALNHIDGH SENTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA 240
  241 CAGDIDVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 39.39794 NagD from E.coli K-12 strain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • hydrolase activity
    		•  0.908568440323554 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle