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Protein Overview: gi|24374850, gi|...

General Information:
Name(s) found: gi|24374850 [NCBI NR]
gi|24349542 [NCBI NR]
Description(s) found:
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  • gi|24374850|ref|NP_718893.1| OmpA family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349542|gb|AAN56337.1|AE015771_7 OmpA family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • OmpA family protein [Shewanella oneidensis MR-1]gi|24349542|gb|AAN56337.1| OmpA family protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • OmpA family protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: cell outer membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISVKQWIE LTCLALSLSL MLPAYAWQDT DQDGVPDIKD ACPNTPANTS VMANGCVDEV  60
   61 EVTSDNIQCN LNDPSTYSAS DCHHIETAIV YFEFAIAEVD LSQWKALALV KSFLEANTET 120
  121 KLTLVGHTDI VGTPEFNYQL SLQRAQNVKR ILVEDYGFNP NRFTVVGKGI SEPVADNRSS 180
  181 EGRGLNRRVQ FIVNNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] FFAS03 1.03 Structure of a thrombospondin C-terminal fragment reveals a novel calcium core in the type 3 repeats
    2 View Details [67..196] PSI-BLAST 26.30103 No description for 2hqsH was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle