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Protein Overview: ISPE_SHEON

General Information:
Name(s) found: ISPE_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24375326|ref|NP_719369.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350139|gb|AAN56813.1|AE015816_10 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Shewanella oneidensis (strain MR-1) GN=ispE PE=3 SV=1 [Swiss-Prot]
  • 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Shewanella oneidensis MR-1]gi|24350139|gb|AAN56813.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Shewanella oneidensis MR-1]gi|29336673|sp|Q8EAR0|ISPE_SHEON 4-diphosphocytidyl-2-C-methyl-D-erythri [nrdb_11152004_Chlamydomonas]
  • 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQEISRNWP APAKLNLFLH INGRRSDGYH ELQTLFQFVD CCDQLDFRVT DTPELILHST  60
   61 MSAVVADSDN LILRAAKSLQ QATGFNGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNRL 120
  121 WNTQLSHDEL AAIGLKLGAD IPVFIHGFAA FAQGVGERLQ AVNPAELWYL VIAPDAHVST 180
  181 AAVFQDPLLP RNTPKLGLDT LLSQPWANDC QELVVSKYPQ VAKALGWLLE YAPSRMTGTG 240
  241 ACVFGEFSSQ QQALAALAKL PSDMQGFVAK GMNISPLIVR LNRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 64.09691 Ternary complex of 4-diphosphocytidyl-2C-methyl-D-erythritol kinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
    		•  1.9881460462076 bayes_pls_golite062009
  • catalytic activity
    		•  1.20658247466773 bayes_pls_golite062009
  • diphosphomevalonate decarboxylase activity
    		•  1.0502744466494 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle