YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ILVD_SHEON

General Information:
Name(s) found: ILVD_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Dihydroxy-acid dehydratase OS=Shewanella oneidensis (strain MR-1) GN=ilvD PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoleucine biosynthetic process [ISSLink to PubMed article]
    valine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: dihydroxy-acid dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKLRSATST EGRNMAGARA LWRATGVKDN DFGKPIIAIA NSFTQFVPGH VHLKDMGSLV  60
   61 ASAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS 120
  121 NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSDKLI KLDLVDAMVA AADSSVSDED 180
  181 SAKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHSDRRE LFLEAGRRVM 240
  241 ALTKRYYEQD DTSALPRNIA CFKAFENATA LDIAMGGSSN TVLHLLAAAQ EAEVAFTMDD 300
  301 IDRMSRLVPH LCKVAPSTPK YHMEDVHRAG GVMGILGELD RAGLLHTDVP HVAADAGGNL 360
  361 KSVLAKYDVM QTQDDNVKQF FMAGPAGIPT TKAFSQDCRW PSLDDDRREG CIRSREFAFS 420
  421 QEGGLAVLSG NLAENGCIVK TAGVDESNLI FVGSARVYES QDDAVAGILG GEVVAGDVVV 480
  481 IRYEGPKGGP GMQEMLYPTS YLKSRGLGKA CALITDGRFS GGTSGLSIGH VSPEAAAGGT 540
  541 IALIENGDRI EIDIPARSIK LAVSDAELAG RRETMLARGP MAWKPVGRER FVSMALKAYA 600
  601 MLATSADKGA VRDRSKLED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..619] PSI-BLAST 163.0 No description for 2gp4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  5.35660492472618 bayes_pls_golite062009
  • catalytic activity
    		•  1.61959327305722 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.16841092671386 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.13002130445077 bayes_pls_golite062009
  • lyase activity
    		•  1.11228159918123 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle