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Protein Overview: gi|24376234, gi|...

General Information:
Name(s) found: gi|24376234 [NCBI NR]
gi|24344699 [NCBI NR]
Description(s) found:
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  • gi|24376234|ref|NP_720342.1| type II restriction endonuclease, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24344699|gb|AAN52942.1| type II restriction endonuclease, subtype P [Shewanella oneidensis MR-1] [NCBI NR]
  • type II restriction endonuclease, putative [Shewanella oneidensis MR-1]gi|24344699|gb|AAN52942.1| type II restriction endonuclease, putative [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • type II restriction endonuclease, subtype P [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • type II restriction endonuclease, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA restriction-modification system [TASLink to PubMed article]
    Molecular Function: restriction endodeoxyribonuclease activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLMTGLIK VDNITRSGLT IYDRIRTGDQ QFWLTSEELS AVLNLRLKGT SFYGLAIRTR  60
   61 SKVAKELVCN ALGYKVPSSF VKCQPRFSGQ MFDTYVQKSN NLQVWNEELD VERRYVIIRT 120
  121 DENDIITQVK VIAGSDLAVL DTTGTLTQKF QARLTLSDQK MELISHFDTL NIQKILAPIS 180
  181 LNLEIDSPVS QPQNGKLLPI GECFRRLSKI VGCSFTDAGR TQERNRGAAL HALVCKALGY 240
  241 TDYRDNGQFP DIKHQLLEVK LQTSPTIDLG LVCPNSQANL DIEQLGLQQI RHCDVRYAIF 300
  301 YGYIVNGLVH ITNLYLTTGE DFFNRFEQFG GKVLNKKIQI PLPRDFFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] deduced N/A No confident structure predictions are available.
    2 View Details [220..348] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle