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Protein Overview: FUMC_LEPIC

General Information:
Name(s) found: FUMC_LEPIC [Swiss-Prot]
Description(s) found:
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  • gi|45656068|ref|YP_000154.1| fumarate hydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] [NCBI NR]
  • gi|45599301|gb|AAS68791.1| fumarate hydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] [NCBI NR]
  • Fumarate hydratase class II OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=fumC PE=3 SV=1 [Swiss-Prot]
  • fumarate hydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130]gi|24212885|ref|NP_710366.1| Fumarate hydratase [Leptospira interrogans serovar Lai str. 56601]gi|24193550|gb|AAN47384.1| Fumarate hydratase [Leptospira interrogans serov [nrdb_11152004_Chlamydomonas]
  • fumarate hydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] [nr-271106-contam.fasta]
    • Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRIETDSM GEIAVDDSKY WGAQTERSLH HFHIGNDRFP REMIRALGIL KKSAAVVNAE  60
   61 LGLLSEDKKK LIVQAADEVI SGKLDEHFPL SVWQTGSGTQ TNMNSNEVIS NRAIEIAGGV 120
  121 KGSKKPIHPN DDVNKAQSSN DTFPTAMHIA AAEQLNQKLI PALIQLKETF KKKTDEFQNI 180
  181 IKIGRTHLQD ATPLTLGQEF SGYVQQLEYN IARVKAVLPS VYRLALGGTA VGTGLNTHPQ 240
  241 FAVKAAAQIA KETGLPFVSA ENKFEALAAH DSLVETSGVL KTIAASLMKI ANDIRWLSSG 300
  301 PRCGIGEISI PENEPGSSIM PGKVNPTQSE QMTMVAAQVI ANDVAVNIGG ASGNFELNVF 360
  361 KPLIIHNVLN SIRLLSDSCV SFEEHCARGI IPNKEKLNEH LNNSLMLVTA LNPHIGYDNA 420
  421 AKIAKNAHKK GTTLKESGIE LGLLTSEQFD QWVLPEKMIH PSVD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 154.0 RECOMBINANT YEAST FUMARASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fumarate hydratase activity
    		•  4.22589182982073 bayes_pls_golite062009
  • catalytic activity
    		•  2.51282259572665 bayes_pls_golite062009
  • lyase activity
    		•  2.31268471569846 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  2.2046475419807 bayes_pls_golite062009
  • histidine ammonia-lyase activity
    		•  0.948129236753279 bayes_pls_golite062009
  • amidine-lyase activity
    		•  0.901614580251298 bayes_pls_golite062009
  • binding
    		•  0.854855116369286 bayes_pls_golite062009
  • argininosuccinate lyase activity
    		•  0.617974375213548 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.491229595527877 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle