Protein Overview: gi|46580017, gi|...

General Information:
Name(s) found:	gi\|46580017 [NCBI NR] gi\|46449433 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|46580017\|ref\|YP_010825.1\| TrkA family potassium uptake protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR] gi\|46449433\|gb\|AAS96084.1\| potassium uptake protein, TrkA family [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR] potassium uptake protein, TrkA family [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]gi\|46449433\|gb\|AAS96084.1\| potassium uptake protein, TrkA family [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [nrdb_11152004_Chlamydomonas] potassium uptake protein, TrkA family [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [nr-271106-contam.fasta]
Organism:	Desulfovibrio vulgaris str. Hildenborough
Length:	350 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMRGRLPL STRIYRLRNR FGSVWPLLIG QVSLLCVFIC ATLGYMYIEG WSAFDSFYMV  60
   61 VITLSTIGFG EVHPLSSQGR LLTTLVVFAG VGNFAFIIGA FSQLLVDGKL YRYMGRRRVL 120
  121 KAIAKLRDHC IVCGYGRIGS VVAKELMEEG VALVVIENDP AMIEALETEG ILHLAGDATN 180
  181 DELLQAAGIE RARALVAALS LDSANVYVVL SAHQINPSMT IVARASEPSH IGKLKLAGAD 240
  241 RVFLPHHLGG LRMAQSILRP TVTSFIELAH TRSDLSIQME ELEIGDDSVL VGKTLIESGI 300
  301 RPQYNLIIIG VKRPDGTMHF NPESTYTLQA RDTLIAVGFP ENFKQFQEIL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
inward rectifier potassium channel activity	2.81500823121833	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	1.14277756574473	bayes_pls_golite062009
catalytic activity	1.03099072397093	bayes_pls_golite062009
cation transmembrane transporter activity	0.94135881928576	bayes_pls_golite062009
ion transmembrane transporter activity	0.892063888939586	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.697182336588227	bayes_pls_golite062009
potassium ion transmembrane transporter activity	0.613422790701159	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.579753312473772	bayes_pls_golite062009
ligand-gated ion channel activity	0.50675258782641	bayes_pls_golite062009
ligand-gated channel activity	0.50675258782641	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.409257304074437	bayes_pls_golite062009
potassium channel activity	0.175535409866419	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	0.0910712778990327	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..350]	PSI-BLAST	35.39794	Potassium channel-related protein MthK

Protein Overview: gi|46580017, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: