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Protein Overview: gi|50119449, gi|...

General Information:
Name(s) found: gi|50119449 [NCBI NR]
gi|49609975 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|50119449|ref|YP_048616.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49609975|emb|CAG73413.1| putative phosphonate metabolism protein [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNIAANSG GIVFHFLGTG GAQQVPAFGC ECEVCQQAQR NESKRRRACC AAITTKDRII  60
   61 LIDAGLPELS PYLLPYPQRH ILLTHYHMDH VQGLFPLRWG YGEPIPVFGP PDEAGCDDLF 120
  121 KHPGILHFQK PLMAFQPFEL DGIRITPVPL IHSKLTYGYL IQTPTHTLAY LTDTIGLPPE 180
  181 TTQFLASHTL DYAIVDCSHP PQTMLPRNHN DITRALEIFT QLNPKQLYLT HISHELDRWL 240
  241 QTQTLLPENV HAAYDGLVLG L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 29.0 Crystal structure of RNase Z

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.31184084417389 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle