YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|25520739

General Information:
Name(s) found: gi|25520739 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • pir||F97680 hypothetical 35.7K protein in mala 3'region (orf3) [imported] - Agrobacterium tumefaciens (strain C58, Cereon) [NCBI NR]
  • AGR_C_4856p [Agrobacterium tumefaciens str. C58]gi|15157890|gb|AAK88399.1| AGR_C_4856p [Agrobacterium tumefaciens str. C58]gi|25520739|pir||F97680 hypothetical 35.7K protein in mala 3'region (orf3) [imported] - Agrobacterium tumefaciens (strain C58, Cer [nrdb_11152004_Chlamydomonas]
    • Organism: Agrobacterium tumefaciens
    Length: 212 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRYACSAKR FGELAMPRLF TALEIPRNAA MSLSLLRGGL PGARWIDVEN YHITLRFIGD  60
   61 IDGRTADEVV DRLDRIERPE FQLNLTGIGS FGSKKPHSIW AGVSPSPEMH ALQAEVERIC 120
  121 QRIGLPPDPR KFMPHVTLAR LRSSRVDDVV HYLSGRGNFR TSPFTVGRFV LMSSKESVGG 180
  181 GPYVVEEAFP LHEARSSSIF SSNDLHPAKS ML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 49.0 Crystal Structure of a Pyrococcus horikoshii protein with similarities to 2'5' RNA-ligase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle