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Protein Overview: gi|30265331, gi|...

General Information:
Name(s) found: gi|30265331 [NCBI NR]
gi|30260009 [NCBI NR]
Description(s) found:
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  • gi|30265331|ref|NP_847708.1| F0F1 ATP synthase subunit delta [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30260009|gb|AAP29194.1| ATP synthase F1, delta subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • ATP synthase F1, delta subunit [Bacillus cereus ZK]gi|51973721|gb|AAU15271.1| ATP synthase F1, delta subunit [Bacillus cereus ZK]gi|49480408|ref|YP_039300.1| ATP synthase F1, delta subunit [Bacillus thuringiensis serovar konkukian str. 97-27]gi|4918814 [nrdb_11152004_Chlamydomonas]
  • ATP synthase F1, delta subunit [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • ATP synthase subunit D [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 180 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [ISSLink to PubMed article]
    Biological Process: ATP synthesis coupled proton transport [ISSLink to PubMed article]
    Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNGIVAKRY AVALFKIAKE KHVLEMFEEE LRLVQNVYEK NGELHSFLTQ PNISKEQKKT  60
   61 FLANVFGSVS ESILNTLYIL IDNKRIDILS DIANEYVVLA NEERNVADAT VYSTRLLSEE 120
  121 EKLNIAEAFA KRTGKDAIRV KNVVDEDLLG GIKVRIGNRI YDGSLQGKLA RIQRELMKNR 180
  181

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] PSI-BLAST 27.522879 N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI, NMR, MINIMIZED AVERAGE STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  14.7422820889757 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  12.9278793563887 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  11.1783751674743 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  10.0680074813957 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  6.33234611151135 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.2273693570543 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.80354336411519 bayes_pls_golite062009
  • transporter activity
    		•  4.02094516916098 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.93981768923161 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.93135059223129 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle