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Protein Overview: gi|25389201

General Information:
Name(s) found: gi|25389201 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||F95180 cation efflux family protein [imported] - Streptococcus pneumoniae (strain TIGR4) [NCBI NR]
    • Organism: Streptococcus pneumoniae
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQSISNLKL AERGAIISIS TYLILSAAKL AAGHLLHSSS LVADGFNNVS DIIGNVALLI  60
   61 GIRMARQPAD RDHRFGHWKI EDLASLITSI IMFYVGFDVL RDTIQKILSR EETVIDPLGA 120
  121 TLGIISAAIM FVVYLYNTRL SKKSNSNALK AAAKDNLSDA VTSLGTAIAI LASSFNYPIV 180
  181 DKLVAIIITF FILKTAYDIF IESSFSLSDG FDDRLLEDYQ KAIMEIPKIS KVKSQRGRTY 240
  241 GSNIYLDITL EMNPDLSVFE SHEIADQVES MLEERFGVFD TDVHIEPAPI PEDEILDNVY 300
  301 KKLLMREQLI DQGNQLEELL TDDFVYIRQD GEQMDKEAYK TKKELNSAIK DIQITSISQK 360
  361 TKLICYELDG IIHTSIWRRH ETWQNIFHQE TKKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 58.0 No description for 2qfiA was found.
    2 View Details [291..394] FFAS03 1.77 No description for 2r4iA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  4.5307404935943 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.4634224995221 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.1916987544196 bayes_pls_golite062009
  • transporter activity
    		•  2.72282838578572 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.61155472577391 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.37288341875523 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.43383523050563 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.253156897715141 bayes_pls_golite062009
  • binding
    		•  0.112542057149574 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0523266677042269 bayes_pls_golite062009
    2
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  0.909402729936813 bayes_pls_golite062009
  • binding
    		•  0.682592304899812 bayes_pls_golite062009
  • protein binding
    		•  0.218842901565592 bayes_pls_golite062009
  • transporter activity
    		•  0.215781707476951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle