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Protein Overview: XYLA_ARATH

General Information:
Name(s) found: XYLA_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Xylose isomerase OS=Arabidopsis thaliana GN=XYLA PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: carbohydrate metabolic process [IEA][ISS]
    Molecular Function: xylose isomerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVEFFMLL LCFIAASSLV SADPPTCPAD LGGKCSDSDD WQGDFFPEIP KIKYEGPSSK  60
   61 NPLAYRWYNA EEEILGKKMK DWFRFSVAFW HTFRGTGGDP FGAATKYWPW EDGTNSVSMA 120
  121 KRRMRANFEF LKKLGVDWWC FHDRDIAPDG TTLEESNKNL DEVIELAKEL QKGSKIKPLW 180
  181 GTAQLFLHPR YMHGGATSSE VGVYAYAAAQ VKKAMEVTHY LGGENYVFWG GREGYQTLLN 240
  241 TDMGRELDHL ARFFEAAVAY KKKIGFKGTL LIEPKPQEPT KHQYDWDAAT AANFLRKYGL 300
  301 IDEFKLNIEC NHATLSGHTC HHELETARIN GLLGNIDANT GDAQTGWDTD QFLTDVGEAT 360
  361 MVMMSVIKNG GIAPGGFNFD AKLRRESTDV EDLFIAHISG MDTMARGLRN AVKILEEGSL 420
  421 SELVRKRYAT WDSELGKQIE EGKADFEYLE KKAKEFGEPK VSSAKQELAE MIFQSAM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..477] PSI-BLAST 137.0 D-xylose isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.98215297280495 bayes_pls_golite062009
  • catalytic activity
    		•  1.66019571685402 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  1.51395393690522 bayes_pls_golite062009
  • xylose isomerase activity
    		•  1.22142207909888 bayes_pls_golite062009
  • isomerase activity
    		•  0.52890695130173 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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