YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pkd-2

General Information:
Name(s) found: pkd-2 / CE38663 [WormBase]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • WBGene00004035 locus:pkd-2 Polycystin-2 status:Partially_confirmed UniProt:Q9U1S7 protein_id:CAB60565.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 716 amino acids

    Gene Ontology:
    Cellular Component: dendrite [IDALink to PubMed articleLink to PubMed article]
    membrane [IEALink to PubMed article]
    cilium [IDALink to PubMed articleLink to PubMed article]
    neuronal cell body [IDALink to PubMed articleLink to PubMed article]
    organelle membrane [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    axon [IDALink to PubMed articleLink to PubMed article]
    Biological Process: mating behavior [IGILink to PubMed article][IMPLink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYGAADERW ANPPQPVAAA EHGPSFDHSM VSEEYEHDKK KNPAQKEGIS FSQALLASGH  60
   61 EKSDGKIKLT ARSFMEVGGY AVFLIVLVYV AFAQNSIQSY YYSKVMSDLF VASTGASGAP 120
  121 AFGSCTSMDN IWDWLSQVLI PGIYWTETSN STDNENMIYY ENRLLGEPRI RMLKVTNDSC 180
  181 TVMKSFQREI KECFANYEEK LEDKTMVGDG SVDAFIYATA KELENLKTVG TIASYGGGGF 240
  241 VQRLPVAGST EAQSAIATLK ANRWIDRGSR AIIVDFALYN ANINLFCVVK LLFELPASGG 300
  301 VITTPKLMTY DLLTYQTSGG TRMMIFEGIF CGFILYFIFE ELFAIGRHRL HYLTQFWNLV 360
  361 DVVLLGFSVA TIILSVNRTK TGVNRVNSVI ENGLTNAPFD DVTSSENSYL NIKACVVFVA 420
  421 WVKVFKFISV NKTMSQLSST LTRSAKDIGG FAVMFAVFFF AFAQFGYLCF GTQIADYSNL 480
  481 YNSAFALLRL ILGDFNFSAL ESCNRFFGPA FFIAYVFFVS FILLNMFLAI INDSYVEVKA 540
  541 ELARKKDGEG ILDWFMNKVR GLTKRGKRPD APGEDATYED YKLMLYRAGY AEKDINEAFT 600
  601 RFNVTSMTEH VPEKVAEDIA DEVARMTEQK RNYMENHRDY ANLNRRVDQM QESVFSIVDR 660
  661 IEGVNATLQT IEKQRVQQQD GGNLMDLSAL LTNQVRNRES AARRPTITSI ADKKEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] deduced N/A No confident structure predictions are available.
    2 View Details [159..634] PSI-BLAST 48.045757 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [635..716] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle