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Protein Overview: gi|77548469

General Information:
Name(s) found: gi|77548469 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|77548469|gb|ABA91266.1| NAC domain transcription factor, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSGGAMPA LPPGFRFHPT DEELIVHYLM NQAASVKCPV PIIAEVNIYK CNPWDLPGKA  60
   61 LFGENEWYFF SPRDRKYPNG ARPNRAAGSG YWKATGTDKS ILSTPTSDNI GVKKALVFYK 120
  121 GKPPKGVKTD WIMHEYRLTG TSANSTTTTK QRRASSMTMR LDDWVLCRIH KKSNDFNSSD 180
  181 QHDQEPEEST VEQLEDIHDN NSSEQPPAPA DMNNQQSDFQ PMTAMSMSKS CSLTDLLNTI 240
  241 DCAALSQFLL DGSSDAIAEP PAPPSPLIYT TPHPNYQTLN YNINSNSSMP HAFESRLDHH 300
  301 DGYVNNYNVN GLRRKRMMAC SATSFDDGSS SNDFVHAVVK KPQLLPSDSR GSGFGGGYCN 360
  361 QQLSETATGF QFQNGNLLSH PFPLNNHLQM Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] PSI-BLAST 64.69897 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    2 View Details [201..391] MSA 2.238985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle