Protein Overview: TRPM1_RAT

General Information:
Name(s) found:	TRPM1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|83627713\|ref\|NP_001032823.1\| transient receptor potential cation channel, subfamily M, member 1 isoform 1 [Rattus norvegicus] [NCBI NR] gi\|83318701\|emb\|CAI30141.1\| transient receptor potential cation channel,subfamily M, member 1 long variant [Rattus norvegicus] [NCBI NR] gi\|123779859\|sp\|Q2WEA5.1\|TRPM1_RAT RecName: Full=Transient receptor potential cation channel subfamily M member 1; AltName: Full=Melastatin-1 [NCBI NR] Transient receptor potential cation channel subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 PE=2 SV=1 [Swiss-Prot] Tax_Id=10116 Transient receptor potential cation channel,subfamily M, member 1 long variant [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Transient receptor potential cation channel subfamily M member 1 (Melastatin-1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] transient receptor potential cation channel, subfamily M, member 1 isoform 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] transient receptor potential cation channel,subfamily M, member 1 long variant [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Trpm1 Isoform 1 of Transient receptor potential cation channel subfamily M member 1 [rat-ipi-250309-contam.fasta] Isoform 1 of Transient receptor potential cation channel subfamily M member 1 OS=Rattus norvegicus GN=Trpm1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1628 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA] plasma membrane [IEA]
Biological Process:	cellular response to light stimulus [UNKNOWN] ion transport [IEA] transmembrane transport [IEA] visual perception [UNKNOWN]
Molecular Function:	ion channel activity [IEA] receptor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSMRKMSSS FKRGSIKSST SGSQKGQKAW IEKTFCKREC IFVIPSTKDP NRCCCGQLTN  60
   61 QHIPPLPSVT PSSTAEDTKQ GDAQSGKWSV SKHTQSYPTD SYGILEFQGG GYSNKAMYIR 120
  121 VSYDTKPDSL LHLMVKDWQL ELPKLLISVH GGLQSFEMQP KLKQVFGKGL IKAAMTTGAW 180
  181 IFTGGVSTGV VSHVGDALKD HSSKSRGRLC AIGIAPWGMV ENKEDLVGKD VTRVYQTMSN 240
  241 PLSKLSVLNN SHTHFILADN GTLGKYGAEV KLRRQLEKHI SLQKINTRLG QGVPVVGLVV 300
  301 EGGPNVVSIV LEYLREDPPV PVVVCDGSGR ASDILSFAHK YCDEGGVINE SLRDQLLVTI 360
  361 QKTFNYSKSQ SHQLFAIIME CMKKKELVTV FRMGSEGQQD VEMAILTALL KGTNVSAPDQ 420
  421 LSLALAWNRV DIARSQIFVF GPHWPPLGSL APPVDTKVAE KEKKPPTATT KGRGKGKGKK 480
  481 KGKVKEEVEE ETDPRKIELL NWVNALEQAM LDALVLDRVD FVKLLIENGV NMQHFLTIPR 540
  541 LEELYNTRLG PPNTLHLLVR DVKKSNLPPD YHISLIDIGL VLEYLMGGAY RCNYTRKSFR 600
  601 TLYNNLFGPK RPKALKLLGM EDDEPPAKGK KKKKKKKEEE IDIDVDDPAV SRFQYPFHEL 660
  661 MVWAVLMKRQ KMAVFLWQRG EECMAKALVA CKLYKAMAHE SSESELVDDI SQDLDNNSKD 720
  721 FGQLAVELLD QSYKHDEQVA MKLLTYELKN WSNSTCLKLA VAAKHRDFIA HTCSQMLLTD 780
  781 MWMGRLRMRK NPGLKVIMGI LIPPTILFLE FRSYDDFSYQ TSKENEDGKE KEEENVDANA 840
  841 DAGSRKGDEE NEHKKQRSIP IGTKICEFYN APIVKFWFYT ISYLGYLLLF NYVILVRMDG 900
  901 WPSPQEWIVI SYIVSLALEK IREILMSEPG KLSQKIKVWL QEYWNITDLV AISMFMVGAI 960
  961 LRLQNQPYMG YGRVIYCVDI ILWYIRVLDI FGVNKYLGPY VMMIGKMMID MLYFVVIMLV1020
 1021 VLMSFGVARQ AILHPEEKPS WKLARNIFYM PYWMIYGEVF ADQIDRKTRI HIYAMEINPP1080
 1081 CGENLYDEEG KRLPPCIPGA WLTPALMACY LLVANILLVN LLIAVFNNTF FEVKSISNQV1140
 1141 WKFQRYQLIM TFHDRPVLPP PMIILSHIYI IVMRLSGRCR KKREGDQEER DRGLKLFLSD1200
 1201 EELKKLHEFE EQCVQEHFRE KEDEQQSSSD ERIRVTSERV ENMSMRLEEI NERENFMKAS1260
 1261 LQTVDLRLSQ LEELSGRMVG ALENLAGIDR SDLIQARSRA SSECEATYLL RQSSINSADG1320
 1321 YSMYRYHFNG EELLFEEPAL STSPGTVFRK KTCSFRVKEE DVKPHLDQPS SLHHTPGPSP1380
 1381 PATPGRSRLA LDGPLSTELR PGLDPGISAG ELDPRADFKS AEVAPSLNTA NVASTQLTVE1440
 1441 STVSHPLRES KLARYYPGDL NTYKTMKSRS FVYSEGRKLV RGLSNWGAEY SSIMDQTWNS1500
 1501 AEWRCQVQRI TRSRSTDIPY IVSEAASQDE FEDEHRESLL APQISRSALT VSDRPEKENL1560
 1561 LSVKPHQTLG FPCLRSRSLH GHPRSAKPSP SKLDRAGHAS STSNLAVMSD APEGQNTQQE1620
 1621 KGNPETEC

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: TRPM1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: