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Protein Overview: SEC9

General Information:
Name(s) found: SEC9 / YGR009C [SGD]
Description(s) found:
Found 26 descriptions.
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  • t-SNARE protein important for fusion of secretory vesicles with the plasma membrane; similar to but not functionally redundant with Spo20p; SNAP-25 homolog [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 651 amino acids

    Gene Ontology:
    Cellular Component: SNARE complex [IDALink to PubMed article]
    extrinsic to plasma membrane [IDALink to PubMed article]
    Biological Process: vesicle fusion [TASLink to PubMed article]
    Golgi to plasma membrane transport [TASLink to PubMed article]
    Molecular Function: receptor signaling protein serine/threonine kinase activity [IDALink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKKFFKIK PPEEATPEQN KDTLMELGIS VKNPSKKRKE KFAAYGKFAN DKAEDKVYAP  60
   61 PGYEQYARPQ DELEDLNASP LDANANEATA GSNRGSSGTQ DLGNGAESNS MQDPYAIEND 120
  121 DYRYDDDPYA RFQANKSNGR GSVNAAPYGD YGGGYNGTSL NSYNNDGPYS NQNTSNSWVN 180
  181 ANGRNSLNHS NSTLNVGPSR QTRQPPVSTS TNSLSLDQRS PLANPMQEKR NPYADMNSYG 240
  241 GAYDSNTNRS SGTRQGSSKN ANPYASMAND SYSNGNLNRS ANPYSSRSVR QPQSQQAPMT 300
  301 YTPSFIASDE AARNSEVDLN EEPRTGEFDF EEVYADKSAE NRAALDEPDL NAVMTNEDSI 360
  361 DLNASEVDHS SRQQQQQQWF MDEQQQQQQH FNATNNQYGD QRGYKTFEEI QKEEEARQQQ 420
  421 EEDEAVDEIK QEIKFTKQSS VASTRNTLKM AQDAERAGMN TLGMLGHQSE QLNNVEGNLD 480
  481 LMKVQNKVAD EKVAELKKLN RSILAVHVSN PFNSKRRRRE REEQLKNRKI EEKLMREQTS 540
  541 QQLSQSTQRI EGAMNANNNI SEVRERYQRK NVLEKAKRYQ FENDEEDDEM ELEIDRNLDQ 600
  601 IQQVSNRLKK MALTTGKELD SQQKRLNNIE ESTDDLDINL HMNTNRLAGI R

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) SEC9 SNC1 SSO1 SSO2

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run TOR2 No Comments Reinke A, et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen MSN5 SEC9 2 Uetz P, et al. (2000)
    View Screen THG1 SEC9 1 Hazbun TR, et al. (2003)
    View Screen YNL146W SEC9 1 Unpublished Fields Lab Data
    View Screen YIF1 SEC9 1 Unpublished Fields Lab Data
    View Screen ZIM17 SEC9 1 Unpublished Fields Lab Data
    View Screen HMT1 SEC9 1 Unpublished Fields Lab Data
    View Screen PCF11 SEC9 1 Unpublished Fields Lab Data
    View Screen RAD6 SEC9 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data SEC9 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] deduced N/A No confident structure predictions are available.
    2 View Details [205..302] PSI-BLAST 3.0 STAT3b
    3 View Details [303..651] PSI-BLAST 21.69897 Heavy meromyosin subfragment


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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