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Protein Overview: gi|89049064, gi|...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..124] PSI-BLAST 49.0 No description for 1vs5L was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structural constituent of ribosome
  • 7.45319063235379 bayes_pls_golite062009
  • structural molecule activity
  • 6.87843523680097 bayes_pls_golite062009
  • misfolded RNA binding
  • 4.4877915495248 bayes_pls_golite062009
  • nucleic acid binding
  • 3.7132569326175 bayes_pls_golite062009
  • RNA binding
  • 3.30183895019873 bayes_pls_golite062009
  • DNA binding
  • 2.94486937698231 bayes_pls_golite062009
  • 2.80746531284205 bayes_pls_golite062009
  • binding
  • 2.40532042551671 bayes_pls_golite062009
  • mRNA binding
  • 1.65819015373151 bayes_pls_golite062009
  • translation regulator activity
  • 1.46320772716954 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.40718318783582 bayes_pls_golite062009
  • translation initiation factor activity
  • 1.27539679024898 bayes_pls_golite062009
  • transcription regulator activity
  • 1.24522359765541 bayes_pls_golite062009
  • protein binding
  • 1.20309946451799 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.10289736160471 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.96886436248958 bayes_pls_golite062009
  • ribonuclease activity
  • 0.91658673456122 bayes_pls_golite062009
  • transcription factor activity
  • 0.672797026326101 bayes_pls_golite062009
  • transcription activator activity
  • 0.581984534552921 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 0.474251377131502 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 0.47336621289748 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 0.47336621289748 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.438266295385131 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.39131721416336 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.3506031439435 bayes_pls_golite062009
  • nuclease activity
  • 0.17660139576327 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.1542034177713 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.1542034177713 bayes_pls_golite062009
  • transcription factor binding
  • 0.132487446755259 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 0.0717589400404304 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle